Explore our MERSCOPE Pre-designed Panels

Fast. Reliable. Ready-to-Run

Accelerate discovery with expert-curated content. Our Pre-designed Panels put expert-validated gene content at your fingertips, so you can focus on your science, not panel design.

Focus on Biology, Not Panel Design

Our panels are expertly curated around key biological themes- Oncology, Neuroscience, Immunology, and more, ensuring inclusion of the most relevant marker genes and pathways to support your research goals.

Cost-Effective and Scalable

With no custom design or validation costs, Pre-designed Panels offer a cost-efficient solution for both pilot studies and large-scale projects.

Flexibility with Custom Add-ons

Expand any Pre-designed Panel with up to 100 additional genes tailored to your research question with the performance and reliability of a validated panel design.
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Optimized for Performance

Built and validated for maximum performance on the MERSCOPE Ultra™ Platform, these panels deliver robust, high-quality data, minimizing signal noise and maximizing transcript detection.

Start Experiments 
Sooner

Skip the time-consuming design process. Our Pre-designed Panels are validated and ready-to-run, getting you from idea to data faster.

Standardize Across Labs

Enable cross-study and multi-site comparability with a shared, standardized gene list that minimizes variability and ensures consistent, reproducible results.

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Validated, ready-to-run panels for fast, reproducible spatial discovery.

MERSCOPE Pre-designed Panels provide expertly curated gene sets validated for use on the MERSCOPE Ultra Platform. Built with MERFISH 2.0 chemistry, they deliver high sensitivity, reproducibility, and broad coverage across FFPE and frozen tissues.

Use MERSCOPE Pre-designed Panels to:

  • Accelerate experiments with ready-to-use content for oncology, neuroscience, immunology and more

  • Ensure accuracy and consistency with standardized, validated gene sets

  • Save time and resources by starting with proven, data-backed panel designs 

Sapien

 Pre-designed Panels make MERFISH 2.0™ faster and more accessible for groups that are new to the technology and exploring spatial biology. They’re quick to order, easy to implement, and backed by Vizgen’s expert design, ensuring smooth data analysis. 

 Christina E Baer Ph.D., Associate Professor, UMass Chan Medical School 

Applications
Organ & Tissue atlasing
Brain region & cell mapping
Tumor Micro Profiling
Drug Target Identification & Validation
Organ & Tissue Atlasting
Biomarker Discovery & Development
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Immune response charact
Developmental Biology
Experimental & Predictive Model Validation
Treatment Response Characterization
AI & Foundational Model Training

Existing MERSCOPE Pre-designed Panels

MERSCOPE Human ImmunoOncology Panel 815 Gene, V2.0  

Gene markers for the major cell types and pathways in human solid tumor tissues and adjacent normal tissue​. Major cell types including malignant cells, stromal cells, vascular cells, and immune cells

MERSCOPE Human Brain Panel 
815 Gene, V2.0

Gene markers for the major cell types and pathways in healthy brain, retina, and spinal cord tissues along with corresponding neurodegeneration, and neuroinflammation​. Major cell types including neurons, glial cells, progenitor cells, vascular cells, and immune cells​  

MERSCOPE Human Breast Cancer Panel 815 Gene, V2.0  

Gene markers for the major cell types and pathways in breast cancer and adjacent normal tissue. Major cell types including breast epithelial cells, malignant cells, stromal cells, vascular cells, and immune cells

Immunotherapy
Brain
Breast

MERSCOPE Pan Mouse Panel 815 Gene, V2.0

Gene markers for the major cell types and pathways in healthy skin, kidney, lung, liver, colon, breast, brain, bladder, heart, cervix, colon, esophagus, ovary, vagina, testes, pancreas, prostate, stomach, thyroid, uterus, and their corresponding cancers​. Major cell types including tissue-specific cells, stromal cells, structural cells, and immune cells​ 

MERSCOPE Mouse Pan Neuro Panel 815 Gene, V2.0

Gene markers for the major cell types and pathways in healthy brain, retina, and spine tissue. Major cell types including neurons, glial cells, progenitor cells, vascular cells, and stromal cells

Mouse Gene
Mouse Nueron

New Launched MERSCOPE Pre-designed Panels

MERSCOPE Human Colon and Colon Cancer 815 Gene, V2.0 

Gene markers for the major cell types and pathways in healthy colon tissue and colon cancer​. Major cell types including enterocytes, goblet cells, epithelial cells, tuft cells, stem cells, enterochromaffin cells, enteroendocrine cells, and immune cells​

MERSCOPE Human Lung and Lung Cancer 815 Gene, V2.0

Gene markers for the major cell types and pathways in healthy lung tissue and lung cancer. Major cell types including epithelial cells, endothelial cells, fibroblasts, stromal cells, smooth muscle cells, and immune cells  

 MERSCOPE Human Liver and Liver Cancer 815 Gene, V2.0

 Gene markers for the major cell types and pathways in healthy liver tissue and liver cancer. Major cell types including hepatocytes, biliary cells, stellate cells, cholangiocytes, vascular cells, and immune cells  

Colon
Lungs
Liver

MERSCOPE Pan Human Panel 815 Gene, V 2.0  

Gene markers for the major cell types and pathways in healthy skin, kidney, lung, liver, colon, breast, brain, bladder, heart, cervix, colon, esophagus, ovary, vagina, testes, pancreas, prostate, stomach, thyroid, uterus, and corresponding cancers. Major cell types including tissue-specific cells, stromal cells, structural cells, and immune cells  

MERSCOPE Human Kidney and Kidney Cancer 815 Gene, V2.0  

Genes markers for the major cell types and canonical signaling pathways of kidney and renal cell carcinoma. Major cell types including vascular cells, glomeruli, medullary cells, lymphatic vessel cells, capsule cells, and kidney stem cells

Pan Human
Kidney

Stay tuned for future MERSCOPE Pre-designed Panels (coming soon!)

MERSCOPE Human Tumor EMT Panel 815 Gene, V 2.0
MERSCOPE Human Metabolic Panel 815 Gene, V 2.0
MERSCOPE Human Inflammation Panel 815 Gene, V 2.0
MERSCOPE Human Skin and Skin Cancer Panel 815 Gene, V 2.0
MERSCOPE Human Cardiovascular Panel 815 Gene, V 2.0 
MERSCOPE Mouse ImmunoOncology Panel 815 Gene, V 2.0
MERSCOPE Mouse Lung Panel 815 Gene, V 2.0 
MERSCOPE Mouse Liver Panel 815 Gene, V 2.0
MERSCOPE Mouse Cardiovascular Panel 815 Gene, V 2.0
MERSCOPE Mouse Kidney Panel 815 Gene, V 2.0
MERSCOPE Mouse Transcription Factor Panel A 815 Gene, V 2.0
MERSCOPE Mouse Transcription Factor Panel B 815 Gene, V 2.0

Don't see a gene panel that fits your research?

We can custom-design a panel tailored to your specific research needs. Contact us today to discuss your project and explore a panel designed around your biology.