Explore our MERSCOPE Pre-designed Panels with Add-on Capability
Fast. Reliable. Ready-to-Run
Focus on Biology, Not Panel Design
Our panels are expertly curated around key biological themes- Oncology, Neuroscience, Immunology, and more, ensuring inclusion of the most relevant marker genes and pathways to support your research goals.Flexibility with Custom Add-ons
Expand any Pre-designed Panel with up to 100 additional genes tailored to your research question with the performance and reliability of a validated panel design.Cost-Effective and Scalable
With no custom design or validation costs, Pre-designed Panels offer a cost-efficient solution for both pilot studies and large-scale projects.
Optimized for Performance
Built and validated for maximum performance on the MERSCOPE Ultra™ Platform, these panels deliver robust, high-quality data, minimizing signal noise and maximizing transcript detection.Start Experiments
Sooner
Skip the time-consuming design process. Our Pre-designed Panels are validated and ready-to-run, getting you from idea to data faster.
Standardize Across Labs
Enable cross-study and multi-site comparability with a shared, standardized gene list that minimizes variability and ensures consistent, reproducible results.
Expand your panel
Not finding everything you need? Add up to 100 genes to any Pre-designed Panel.
Every MERSCOPE Pre-designed Panel supports Add-one Gene Panels so you can customize you gene set without starting from scratch. Add up to 100 MERFISH genes tailored to your specific research needs, without compromising panel performance or data quality.
Same validated performance
Add-on genes undergo the same MERFISH 2.0 validation as your base panel with no trade-off in sensitivity or reproducibility.Works with both kits sizes
Compatible with both Small (4 standard / 2 large slides) and Large (10 standard / 5 large slides) kit formats.
FFPE and Fresh Frozen
The same Add-On panels work across sample preservation types. No additional customization steps required.Already have a pre-designed panel? See the FAQ for how to add on genes.
Validated, ready-to-run panels for fast, reproducible spatial discovery.
MERSCOPE Pre-designed Panels provide expertly curated gene sets validated for use on the MERSCOPE Ultra™ Platform. Built with MERFISH 2.0™ chemistry, they deliver high sensitivity, reproducibility, and broad coverage across FFPE and frozen tissues.
Use MERSCOPE Pre-designed Panels to:
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Accelerate experiments with ready-to-use content for oncology, neuroscience, immunology and more
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Ensure accuracy and consistency with standardized, validated gene sets
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Save time and resources by starting with proven, data-backed panel designs
“Pre-designed Panels make MERFISH 2.0™ faster and more accessible for groups that are new to the technology and exploring spatial biology. They’re quick to order, easy to implement, and backed by Vizgen’s expert design, ensuring smooth data analysis.”
Christina E Baer Ph.D., Associate Professor, UMass Chan Medical School
New Launched MERSCOPE Pre-designed Panels
MERSCOPE Human Tumor EMT Panel 815 Gene, V 2.0
Gene markers for the major cell types and pathways involved in epithelial-mesenchymal transition (EMT) and tumor progression. Major cell types and processes including epithelial cells, mesenchymal cells, cancer-associated fibroblasts, migratory tumor cells, invasive front cells, and immune cells
MERSCOPE Human Metabolic Panel 815 Gene, V 2.0
Gene markers for the major cell types and metabolic pathways across healthy and diseased tissues. Major cell types and processes including hepatocytes, adipocytes, pancreatic islet cells, skeletal muscle cells, brown and white adipose cells, and immune cells
MERSCOPE Human Inflammation Panel 815 Gene, V 2.0
Gene markers for the major cell types and signaling pathways involved in acute and chronic inflammatory responses. Major cell types including macrophages, neutrophils, dendritic cells, mast cells, T cells, B cells, endothelial cells, and stromal cells
MERSCOPE Human Skin and Skin Cancer Panel 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy skin tissue and skin cancer. Major cell types including keratinocytes, melanocytes, fibroblasts, Langerhans cells, Merkel cells, endothelial cells, and immune cells
MERSCOPE Human Cardiovascular Panel 815 Gene, V 2.0
Gene markers for the major cell types and signaling pathways in healthy cardiac and vascular tissue and cardiovascular disease. Major cell types including cardiomyocytes, endothelial cells, vascular smooth muscle cells, pericytes, cardiac fibroblasts, and immune cells
MERSCOPE Mouse ImmunoOncology Panel 815 Gene, V 2.0
Gene markers for the major immune cell types and pathways governing tumor immunity and the tumor microenvironment in mouse models. Major cell types including cytotoxic T cells, regulatory T cells, natural killer cells, macrophages, dendritic cells, myeloid-derived suppressor cells, and tumor cells
MERSCOPE Mouse Lung Panel 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy mouse lung tissue and lung disease models. Major cell types including alveolar epithelial cells, club cells, ciliated cells, endothelial cells, fibroblasts, smooth muscle cells, and immune cells
MERSCOPE Mouse Liver Panel 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy mouse liver tissue and liver disease models. Major cell types including hepatocytes, Kupffer cells, hepatic stellate cells, cholangiocytes, sinusoidal endothelial cells, and immune cells
MERSCOPE Mouse Cardiovascular Panel 815 Gene, V 2.0
Gene markers for the major cell types and signaling pathways in healthy mouse cardiac and vascular tissue and cardiovascular disease models. Major cell types including cardiomyocytes, endothelial cells, vascular smooth muscle cells, pericytes, cardiac fibroblasts, and immune cells
MERSCOPE Mouse Kidney Panel 815 Gene, V 2.0
Gene markers for the major cell types and canonical signaling pathways in healthy mouse kidney tissue and renal disease models. Major cell types including proximal and distal tubular cells, glomerular cells, collecting duct cells, vascular cells, lymphatic vessel cells, and immune cells
MERSCOPE Human Colon and Colon Cancer 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy colon tissue and colon cancer. Major cell types including enterocytes, goblet cells, epithelial cells, tuft cells, stem cells, enterochromaffin cells, enteroendocrine cells, and immune cellsMERSCOPE Human Lung and Lung Cancer 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy lung tissue and lung cancer. Major cell types including epithelial cells, endothelial cells, fibroblasts, stromal cells, smooth muscle cells, and immune cells
MERSCOPE Human Liver and Liver Cancer 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy liver tissue and liver cancer. Major cell types including hepatocytes, biliary cells, stellate cells, cholangiocytes, vascular cells, and immune cells
MERSCOPE Pan Human Panel 815 Gene, V 2.0
Gene markers for the major cell types and pathways in healthy skin, kidney, lung, liver, colon, breast, brain, bladder, heart, cervix, colon, esophagus, ovary, vagina, testes, pancreas, prostate, stomach, thyroid, uterus, and corresponding cancers. Major cell types including tissue-specific cells, stromal cells, structural cells, and immune cells
MERSCOPE Human Kidney and Kidney Cancer 815 Gene, V 2.0
Genes markers for the major cell types and canonical signaling pathways of kidney and renal cell carcinoma. Major cell types including vascular cells, glomeruli, medullary cells, lymphatic vessel cells, capsule cells, and kidney stem cells
MERSCOPE Mouse Transcription Factor Panel A 815 Gene, V 2.0 and MERSCOPE Mouse Transcription Factor Panel B 815 Gene, V 2.0
Comprehensive paired panels combining 150 cell type marker genes with transcription factor content across mouse tissues, enabling simultaneous cell type identification and gene regulatory network analysis in a single experiment. Together, Panels A and B measure every annotated mouse transcription factor, delivering complete TF coverage for cell state profiling, lineage tracing, and developmental and disease model studies
Existing MERSCOPE Pre-designed Panels
MERSCOPE Human ImmunoOncology Panel 815 Gene, V2.0
Gene markers for the major cell types and pathways in human solid tumor tissues and adjacent normal tissue. Major cell types including malignant cells, stromal cells, vascular cells, and immune cells
MERSCOPE Human Brain Panel
815 Gene, V2.0
Gene markers for the major cell types and pathways in healthy brain, retina, and spinal cord tissues along with corresponding neurodegeneration, and neuroinflammation. Major cell types including neurons, glial cells, progenitor cells, vascular cells, and immune cells
MERSCOPE Human Breast Cancer Panel 815 Gene, V2.0
Gene markers for the major cell types and pathways in breast cancer and adjacent normal tissue. Major cell types including breast epithelial cells, malignant cells, stromal cells, vascular cells, and immune cells
MERSCOPE Pan Mouse Panel 815 Gene, V2.0
Gene markers for the major cell types and pathways in healthy skin, kidney, lung, liver, colon, breast, brain, bladder, heart, cervix, colon, esophagus, ovary, vagina, testes, pancreas, prostate, stomach, thyroid, uterus, and their corresponding cancers. Major cell types including tissue-specific cells, stromal cells, structural cells, and immune cells
MERSCOPE Mouse Pan Neuro Panel 815 Gene, V2.0
Gene markers for the major cell types and pathways in healthy brain, retina, and spine tissue. Major cell types including neurons, glial cells, progenitor cells, vascular cells, and stromal cells
Don't see a gene panel that fits your research?
We can custom-design a panel tailored to your specific research needs. Contact us today to discuss your project and explore a panel designed around your biology.